Create the additional time-to-event endpoints, adjusting for cutpoint
Source:R/fitting.R
create_extrafields.Rd
Create the additional time-to-event endpoints, adjusting for cutpoint
Value
Tibble of complete patient-level dataset, adjusted for cutpoint
ttp.durn
, pfs.durn
, ppd.durn
and os.durn
are the durations of TTP (time to progression), PFS (progression-free survival), PPD (pre-progression death) and OS (overall survival) respectively beyond the cutpoint.
pps.durn
is the duration of survival beyond progression, irrespective of the cutpoint.
pps.odurn
is the difference between ttp.durn
and os.durn
(which may be different to pps.durn
).
ttp.flag
, pfs.flag
, ppd.flag
, os.flag
, and pps.flag
are event flag indicators for TTP, PFS, PPD, OS and PPS respectively (1=event, 0=censoring).
Examples
bosonc <- create_dummydata("flexbosms")
create_extrafields(bosonc, cuttime=10)
#> # A tibble: 204 × 16
#> ptid pfs.odurn pfs.flag os.odurn os.flag ttp.odurn ttp.flag ttp.durn
#> <int> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
#> 1 1 18.7 1 42.9 1 18.7 1 8.67
#> 2 2 12.0 1 23.3 1 12.0 1 2.01
#> 3 3 0.452 1 8.81 1 0.452 1 0
#> 4 4 9.07 1 52.7 1 9.07 1 0
#> 5 5 47.7 0 47.7 0 47.7 0 37.7
#> 6 6 3.26 1 13.1 1 3.26 1 0
#> 7 7 0.738 1 2.74 1 0.738 1 0
#> 8 8 35.5 1 35.5 1 35.5 0 25.5
#> 9 9 10.4 1 37.1 1 10.4 1 0.369
#> 10 10 10.5 1 32.7 1 10.5 1 0.464
#> # ℹ 194 more rows
#> # ℹ 8 more variables: pfs.durn <dbl>, os.durn <dbl>, tzero <dbl>,
#> # pps.odurn <dbl>, pps.durn <dbl>, pps.flag <dbl>, ppd.durn <dbl>,
#> # ppd.flag <dbl>